PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC027222.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 117aa    MW: 12805.9 Da    PI: 9.2246
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC027222.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.00021121828
                  HHHHHHHHHHHHHHHHHCTSC CS
           HLH  8 rErrRRdriNsafeeLrellP 28
                  +Er+RR r++  f++L +l+ 
  EcC027222.10  1 MERNRRIRMKGLFSKLDSLMD 21
                  6***************99975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.22E-5159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MERNRRIRMK GLFSKLDSLM DMLSQQDAAI QATVAHINQV KEKVDGLKMR KELAMRSNGR  60
QPGALVSGLE VTLISGVDKN SVLSEAISIL KEEGAEAVCA SVSIVGDKVF HTFYAQV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002279841.15e-30PREDICTED: uncharacterized protein LOC100253569
TrEMBLD7SHT76e-30D7SHT7_VITVI; Putative uncharacterized protein
STRINGVIT_17s0000g08150.t012e-29(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.11e-09bHLH family protein